{ "_id": "6a101cbeacfb0bcc41c884cd", "Package": "RcmdrPlugin.depthTools", "Type": "Package", "Title": "R Commander Depth Tools Plug-in", "Version": "1.4", "Date": "2020-10-15", "Author": "Sara Lopez-Pintado and Aurora Torrente\n.", "Maintainer": "Aurora Torrente ", "Description": "We provide an Rcmdr plug-in based on the depthTools\npackage, which implements different robust statistical tools\nfor the description and analysis of gene expression data based\non the Modified Band Depth, namely, the scale curves for\nvisualizing the dispersion of one or various groups of samples\n(e.g. types of tumors), a rank test to decide whether two\ngroups of samples come from a single distribution and two\nmethods of supervised classification techniques, the DS and TAD\nmethods.", "License": "GPL (>= 2)", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-14 08:21:06 UTC", "User": "root" }, "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev tcl tk tk-dev\ntk-table libx11-dev zlib1g-dev", "Repository": "https://aurora-torrente.r-universe.dev", "Date/Publication": "2020-10-16 03:30:02 UTC", "RemoteUrl": "https://github.com/cran/RcmdrPlugin.depthTools", "RemoteRef": "HEAD", "RemoteSha": "c698280d030513afca275b87273a65df5824b5ef", "MD5sum": "7a6178e21c443e2e8fa440e41c956238", "_user": "aurora-torrente", "_type": "src", "_file": "RcmdrPlugin.depthTools_1.4.tar.gz", "_fileid": "58ffae01aa6091c12bf77a43cbbda16db350fcab3da076f860382d257167fc97", "_filesize": 118222, "_sha256": "58ffae01aa6091c12bf77a43cbbda16db350fcab3da076f860382d257167fc97", "_created": "2026-05-14T08:21:06.000Z", "_published": "2026-05-22T09:07:10.815Z", "_distro": "noble", "_jobs": [ { "job": 77349447195, "time": 210, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "6990268612" }, { "job": 77349447415, "time": 198, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "6990265917" }, { "job": 77349447071, "time": 212, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "6990262100" }, { "job": 77349447275, "time": 195, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "6990258583" }, { "job": 77349446565, "time": 227, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "6990214117" }, { "job": 77349446644, "time": 132, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7156857951" }, { "job": 77349447186, "time": 130, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "6990248736" }, { "job": 77349447481, "time": 123, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "6990246650" }, { "job": 77349447378, "time": 155, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "6990255103" } ], "_buildurl": "https://github.com/r-universe/aurora-torrente/actions/runs/25849653098", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/RcmdrPlugin.depthTools", "_commit": { "id": "c698280d030513afca275b87273a65df5824b5ef", "author": "Aurora Torrente ", "committer": "cran-robot ", "message": "version 1.4\n", "time": 1602819002 }, "_maintainer": { "name": "Aurora Torrente", "email": "etorrent@est-econ.uc3m.es", "login": "aurora-torrente", "uuid": 49272313 }, "_registered": true, "_dependencies": [ { "package": "Rcmdr", "version": ">= 1.4-0", "role": "Depends" }, { "package": "tcltk", "role": "Depends" }, { "package": "depthTools", "role": "Depends" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "aurora-torrente", "count": 5, "uuid": 49272313 } ], "_userbio": { "uuid": 49272313, "type": "user", "name": "aurora-torrente" }, "_downloads": { "count": 965, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/RcmdrPlugin.depthTools" }, "_searchresults": 0, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/RcmdrPlugin.depthTools.html", "manual.pdf" ], "_realowner": "aurora-torrente", "_cranurl": false, "_releases": [ { "version": "1.0", "date": "2012-10-29" }, { "version": "1.1", "date": "2013-02-06" }, { "version": "1.2", "date": "2013-04-03" }, { "version": "1.3", "date": "2013-06-13" }, { "version": "1.4", "date": "2020-10-16" } ], "_exports": [ "computeMBD", "computeScaleCurve", "computeTmean", "plotCentralCurves", "runDS", "runRtest", "runTAD" ], "_help": [ { "page": "RcmdrPlugin.depthTools-package", "title": "Graphical User Interface for depthTools", "topics": [ "RcmdrPlugin.depthTools-package", "RcmdrPlugin.depthTools" ] }, { "page": "computeMBD", "title": "Computation of the Modified Band Depth in R-commander", "topics": [ "computeMBD" ] }, { "page": "computeScaleCurve", "title": "Computation and Representation of the Scale Curve", "topics": [ "computeScaleCurve" ] }, { "page": "computeTmean", "title": "Modified Band Depth-Based Alpha Trimmed Mean", "topics": [ "computeTmean" ] }, { "page": "plotCentralCurves", "title": "Plot of the p Percent Most Central Curves of a Dataset", "topics": [ "plotCentralCurves" ] }, { "page": "runDS", "title": "Distance to the Trimmed Mean Classification Method", "topics": [ "runDS" ] }, { "page": "runRtest", "title": "Rank Test Based on the Modified Band Depth", "topics": [ "runRtest" ] }, { "page": "runTAD", "title": "Weighted Trimmed Mean Distance Classification Method", "topics": [ "runTAD" ] } ], "_rundeps": [ "abind", "backports", "base64enc", "bit", "bit64", "boot", "broom", "bslib", "cachem", "car", "carData", "cellranger", "checkmate", "class", "cli", "clipr", "cluster", "colorspace", "cowplot", "cpp11", "crayon", "data.table", "DBI", "depthTools", "Deriv", "digest", "doBy", "dplyr", "e1071", "effects", "estimability", "evaluate", "farver", "fastmap", "fontawesome", "forcats", "forecast", "foreign", "Formula", "fracdiff", "fs", "generics", "ggplot2", "glue", "gridExtra", "gtable", "haven", "highr", "Hmisc", "hms", "htmlTable", "htmltools", "htmlwidgets", "insight", "isoband", "jquerylib", "jsonlite", "knitr", "labeling", "lattice", "lifecycle", "lme4", "lmtest", "magrittr", "MASS", "Matrix", "MatrixModels", "memoise", "mgcv", "microbenchmark", "mime", "minqa", "mitools", "modelr", "nlme", "nloptr", "nnet", "nortest", "numDeriv", "pbkrtest", "pillar", "pkgconfig", "prettyunits", "progress", "proxy", "purrr", "quantreg", "R6", "rappdirs", "rbibutils", "Rcmdr", "RcmdrMisc", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppEigen", "Rdpack", "readr", "readstata13", "readxl", "reformulas", "relimp", "rematch", "rlang", "rmarkdown", "rpart", "rstudioapi", "S7", "sandwich", "sass", "scales", "SparseM", "stringi", "stringr", "survey", "survival", "tcltk2", "tibble", "tidyr", "tidyselect", "timeDate", "tinytex", "tzdb", "urca", "utf8", "vctrs", "viridisLite", "vroom", "withr", "xfun", "yaml", "zoo" ], "_score": 1, "_indexed": true, "_nocasepkg": "rcmdrplugin.depthtools", "_universes": [ "aurora-torrente" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.4", "date": "2026-05-14T08:23:56.000Z", "distro": "noble", "commit": "c698280d030513afca275b87273a65df5824b5ef", "fileid": "c8fd2d239afa543fd3ad227cc228007ec8c2aee9af83be01207616d650ebb794", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/aurora-torrente/actions/runs/25849653098" }, { "r": "4.6.0", "os": "linux", "version": "1.4", "date": "2026-05-14T08:23:52.000Z", "distro": "noble", "commit": "c698280d030513afca275b87273a65df5824b5ef", "fileid": "f126fb0dc9391838808569e08eee59efba08b5a0cc58be5484d43fc3a7e0ad7a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/aurora-torrente/actions/runs/25849653098" }, { "r": "4.5.3", "os": "mac", "version": "1.4", "date": "2026-05-14T08:23:51.000Z", "commit": "c698280d030513afca275b87273a65df5824b5ef", "fileid": "395994ff59aec69fd6fe95a3a94d093187deb1779e4db10f654eef3300857d8b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/aurora-torrente/actions/runs/25849653098" }, { "r": "4.6.0", "os": "mac", "version": "1.4", "date": "2026-05-14T08:23:29.000Z", "commit": "c698280d030513afca275b87273a65df5824b5ef", "fileid": "eb985171b5757aae545eb23f908e49a2b1f3de3714dcdd8674bbcd0aa163f1b9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/aurora-torrente/actions/runs/25849653098" }, { "r": "4.7.0", "os": "win", "version": "1.4", "date": "2026-05-14T08:22:36.000Z", "commit": "c698280d030513afca275b87273a65df5824b5ef", "fileid": "b18dc27281bfb47cc550e113cc239a54f8a138e68f28c5b4fa30eb2d18b6294c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/aurora-torrente/actions/runs/25849653098" }, { "r": "4.5.3", "os": "win", "version": "1.4", "date": "2026-05-14T08:22:34.000Z", "commit": "c698280d030513afca275b87273a65df5824b5ef", "fileid": "7d3ed2bb336bb52acf084c80390b7357d14b5de03fdb377c0ef811acebfe773a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/aurora-torrente/actions/runs/25849653098" }, { "r": "4.6.0", "os": "win", "version": "1.4", "date": "2026-05-14T08:23:02.000Z", "commit": "c698280d030513afca275b87273a65df5824b5ef", "fileid": "874afd7898724c05f831bbdbb96ff307e17151c9294c2c33de56510e9db07659", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/aurora-torrente/actions/runs/25849653098" }, { "r": "4.6.0", "os": "wasm", "version": "1.4", "date": "2026-05-22T09:06:47.000Z", "commit": "c698280d030513afca275b87273a65df5824b5ef", "fileid": "aad4576f18f9afd80988581e848c82902c74d78becd4b91cb8501f09e77c3b54", "status": "success", "buildurl": "https://github.com/r-universe/aurora-torrente/actions/runs/25849653098" } ] }